Publications

2025

Ahmed, Riham A. H., Islam M. Y. Abdellatif, Natsumi Oka, et al. 2025. “Application of 4-CPA or Ethanol Enhances Plant Growth and Fruit Quality of phyA Mutant under Heat Stress.” Scientific Reports 15 (1): 32388. https://doi.org/10.1038/s41598-025-17929-8.

Bashir, Khurram, Daisuke Todaka, Kaori Sako, Minoru Ueda, Farhan Aziz, and Motoaki Seki. 2025. “Chemical Application Improves Stress Resilience in Plants.” Plant Molecular Biology 115 (2): 47. https://doi.org/10.1007/s11103-025-01566-w.

Fan, Yuzhen, Daniel W. A. Noble, Belinda E. Medlyn, et al. 2025. “Environmental Factors Have a Greater Influence on Photosynthetic Capacity in C4 Plants than Biochemical Subtypes or Growth Forms.” New Phytologist 248 (3): 1205–24. https://doi.org/10.1111/nph.70525.

Gurung, Saru, Chang-Muk Lee, Hang-Yeon Weon, So-Ra Han, and Tae-Jin Oh. 2025. “Comparative Genome Analysis of Three Halobacillus Strains Isolated From Saline Environments Reveal Potential Salt Tolerance and Algicidal Mechanisms.” Environmental Microbiology Reports 17 (3): e70121. https://doi.org/10.1111/1758-2229.70121.

Hoang, Trang, Dieu Linh Nguyen, Bomi Kim, et al. 2025. “Ice Affinity Purification System for Recombinant Proteins Using a DUF3494 Ice-Binding Protein.” International Journal of Biological Macromolecules 315 (June): 144378. https://doi.org/10.1016/j.ijbiomac.2025.144378.

Koyama, Tomotsugu, Tadashi Kunieda, Hiromi Toyonaga, et al. n.d. “TCP3-Mediated Regulation of Cell Expansion in Arabidopsis Thaliana.” New Phytologist n/a (n/a). https://doi.org/10.1111/nph.70631.

Kuwayama, Shogo, Maki Hayashi, Koji Takahashi, et al. 2025. “The Protein Kinase Inhibitor, Tyrphostin AG126, and Its Derivatives Suppress Phosphorylation of Plasma Membrane H+-ATPase and Light-Induced Stomatal Opening.” Plant and Cell Physiology 66 (7): 1020–29. https://doi.org/10.1093/pcp/pcaf050.

Marks, R. A., J. T. B. Ekwealor, M. a. S. Artur, et al. 2025. “Life on the Dry Side: A Roadmap to Understanding Desiccation Tolerance and Accelerating Translational Applications.” Nature Communications 16 (1): 3284. https://doi.org/10.1038/s41467-025-58656-y.

Mérai, Zsuzsanna, Fei Xu, Anita Hajdu, László Kozma-Bognár, and Liam Dolan. 2025. “Phytochrome A Is Required for Light-Inhibited Germination of Aethionema Arabicum Seed.” New Phytologist 247 (5): 2134–46. https://doi.org/10.1111/nph.70344.

Minen, Romina I, Maria Dolores Camalle, Tyler J Schwertfeger, et al. 2025. “Characterization of the Cyclic Dipeptide Cyclo(His-Pro) in Arabidopsis.” Plant Physiology 198 (1): kiaf174. https://doi.org/10.1093/plphys/kiaf174.

Nguyen, Dieu Linh, Subhasree Saha, Aswin Thacharodi, et al. 2025. “Environmental pH Controls Antimicrobial Production by Human Probiotic Streptococcus Salivarius.” Journal of Bacteriology 207 (6): e00059-25. https://doi.org/10.1128/jb.00059-25.

Paudel, Lakshan, Bashu D Pardhe, So-Ra Han, Jun Lee, and Tae-Jin Oh. 2025. “CAZyme Analysis and Functional Characterization of a New GH18 Chitin Hydrolase from Gelidibacter Salicanalis PAMC21136.” Carbohydrate Polymer Technologies and Applications 10 (March): 100773. https://doi.org/10.1016/j.carpta.2025.100773.

Paudel, Lakshan, Bashu Dev Pardhe, Sushma Gupta, So-Ra Han, Jun Hyuck Lee, and Tae-Jin Oh. 2026. “Functional Characterization and Effect of Polysaccharides on the Activity of GH16 β-Agarase from Gelidibacter Salicanalis PAMC21136.” Carbohydrate Research 559 (January): 109719. https://doi.org/10.1016/j.carres.2025.109719.

Paudel, Prakash, Kamal Prasad Regmi, Ki-Hwa Kim, and Tae-Jin Oh. 2025. “Discovery of a Novel CYP107E41 from Streptoalloteichus Sp. KCCM40925 for Advancing Steroid Hydroxylation Catalysis.” Archives of Biochemistry and Biophysics 773 (November): 110595. https://doi.org/10.1016/j.abb.2025.110595.

Prado, Karine, Bethany L Holland, Brian McSpadden Gardener, et al. 2025. “Building Climate-Resilient Crops: Genetic, Environmental, and Technological Strategies for Heat and Drought Stress Tolerance.” Journal of Experimental Botany, March 10, eraf111. https://doi.org/10.1093/jxb/eraf111.

Prado, Karine, Bo Xue, Jennifer E. Johnson, et al. 2025. “Photosynthetic Acclimation Is a Key Contributor to Exponential Growth of a Desert Plant in Death Valley Summer.” Current Biology 0 (0). https://doi.org/10.1016/j.cub.2025.10.004.

Robertson, Sean M., Solihu Kayode Sakariyahu, Elisa Gan, et al. 2025. “Growth-Limiting Drought Increases Sensitivity of Asian Rice (Oryza Sativa) Leaves to Heat Shock through Physiological and Spatially Distinct Transcriptomic Responses.” The Plant Journal 123 (2): e70349. https://doi.org/10.1111/tpj.70349.

Saldivar, Evan V., Sterling Field, and Seung Y. Rhee. 2025. “Cellular View of Metabolism: Metabolic Biomolecular Condensates.” New Phytologist 248 (2): 555–62. https://doi.org/10.1111/nph.70474.

Seo, Suyeon, Yong-Yoon Ahn, Kitae Kim, Jun Hyuck Lee, Kyungwon Min, and Hyoungseok Lee. 2025. “Exogenous Abscisic Acid Enhances Freeze-Thaw Stress Tolerance in Antarctic Moss Sanionia Uncinata through Coordinated Antioxidant Defense and Osmoprotectant Accumulation.” Cryobiology 121 (December): 105325. https://doi.org/10.1016/j.cryobiol.2025.105325.

Shrestha, Prasansah, Byeollee Kim, So-Ra Han, Hyun Lee, and Tae-Jin Oh. 2025. “Unraveling the Genetic Mechanisms of UV Radiation Resistance in Bacillus through Biofilm Formation, Sporulation, and Carotenoid Production.” Genomics 117 (4): 111066. https://doi.org/10.1016/j.ygeno.2025.111066.

Shrestha, Santosh Kumar, Nisha Ghimire, Woo-Haeng Lee, Hwa-Jung Kim, and Tae-Jin Oh. 2025. “Characterization of O-Methyltransferase in Streptomyces Sp. KCCM12257 and Bioactivity Assessment of Polyphenols.” International Journal of Biological Macromolecules 319 (August): 145520. https://doi.org/10.1016/j.ijbiomac.2025.145520.

Suzuki, Toon, Mariko Takayama, Minako Sumiyoshi, and Hiroshi Ezura. 2025. “Characterization of the Fruit Quality and Yield of a Genome-Edited High-GABA Tomato Cultivar (Solanum Lycopersicum) Cultivated under Salt Stress Conditions.” ACS Agricultural Science & Technology 5 (7): 1266–73. https://doi.org/10.1021/acsagscitech.4c00572.

Thapa, Gobinda, Saru Gurung, So-Ra Han, and Tae-Jin Oh. 2025. “In-Silico and Biochemical Insights into MHET Biodegradation by Arctic Pseudomonas MHET Hydrolase.” International Journal of Biological Macromolecules 321 (September): 146195. https://doi.org/10.1016/j.ijbiomac.2025.146195.

Tiedge, Kira J., Federico Roda, Stacey D. Smith, and Gaurav D. Moghe. 2025. “Advances in Analyzing and Engineering Plant Metabolic Diversity.” Applications in Plant Sciences 13 (4): e70017. https://doi.org/10.1002/aps3.70017.

Wang, Zhuolun, Stephanie Cara, Seung Y. Rhee, and Bernard A. Hauser. 2025. “Tetratricopeptide Repeat 2 Is a Quantitative Trait Locus That Controls Seed Size.” International Journal of Molecular Sciences 26 (17): 8310. https://doi.org/10.3390/ijms26178310.

Xue, Bo, Karine Prado, Seung Yon Rhee, and Matt Stata. 2025. “UnigeneFinder: An Automated Pipeline for Gene Calling From Transcriptome Assemblies Without a Reference Genome.” Plant Direct 9 (4): e70056. https://doi.org/10.1002/pld3.70056.

Yuan, Xinyu, Nathaniel S. S. Smith, and Gaurav D. Moghe. 2025. “Analysis of Plant Metabolomics Data Using Identification-Free Approaches.” Applications in Plant Sciences 13 (4): e70001. https://doi.org/10.1002/aps3.70001.

Zait, Yotam, Mengmeng Zhu, Eigo Ando, et al. 2025. “Apoplastic Metabolomics Reveals Sugars as Mesophyll Messengers Regulating Guard Cell Ion Transport under Red Light.” Nature Plants 11 (9): 1847–62. https://doi.org/10.1038/s41477-025-02078-7.